By Bud Mishra (auth.), Hirokazu Anai, Katsuhisa Horimoto, Temur Kutsia (eds.)

This quantity constitutes the refereed lawsuits of the second one foreign convention on Algebraic Biology, held on the fort of Hagenberg, Austria in July 2007. The convention used to be run as a part of the learn Institute for Symbolic Computation (RISC) summer season 2007.

Nineteen complete papers are provided, including 3 invited papers and 4 tutorials. every one paper has been conscientiously reviewed by means of the book’s staff of professional editors to make sure every one meets the top criteria of study and scholarship.

The convention served as an interdisciplinary discussion board for the presentation of study on all facets of the applying of symbolic computation in biology, together with computing device algebra, computational common sense, and comparable tools. Papers additionally learn strategies to difficulties in biology utilizing symbolic methods.

Readers study new, leading edge ways to fixing difficulties in biology.

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Extra resources for Algebraic Biology: Second International Conference, AB 2007, Castle of Hagenberg, Austria, July 2-4, 2007. Proceedings

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Volume of Membrane Computing Section, pp. 15–26 (2006) 8. : System theory and biology – view of a theoretician. D. ) System Theory and Biology, pp. 59–87. Springer, New York (1968) 9. : Identification of an intracellular signalling complex for ras/camp pathway in yeast: experimental evidences and modelling. ISSY 25 Conf. Hanassari, Espo, Finland (2006) 10. : Computing with membranes. Journal of Computer and System Sciences, 61(1), pp. fi) 11. : Computing with Membranes. An Introduction. Springer, Berlin (2002) 12.

Appl. Math. in press (2006) 7. : Nested canalyzing, unate cascade, and polynomial functions. Physica D, page under revision (2006) 8. : Random Boolean network models and the yeast transcriptional network. PNAS 100(25), 14796–14799 (2003) 9. : Genetic networks with canalyzing Boolean rules are always stable. PNAS 101(49), 17102–17107 (2004) 10. : Metabolic stability and epigenesis in randomly constructed genetic nets. J. Theor. Biol. 22(3), 437–467 (1969) 11. : The Origins of Order: Self–Organization and Selection in Evolution.

In the late eighties, Snoussi and Thomas extended the original framework by including singular values corresponding to interaction thresholds. They showed that these are needed for a refined understanding of the network dynamics. In this paper, we study systematically singular steady states, which are characteristic of feedback circuits in the interaction graph, and relate them to the type, number and cardinality of attractors in the state transition graph. In particular, we derive sufficient conditions for regulatory networks to exhibit multistationarity or oscillatory behavior, thus giving a partial converse to the well-known Thomas conjectures.

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